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Published Works

[1] G. Singh and H. Song, "Using Hidden Markov Models In Vehicular Crash Detection," IEEE Transactions on Vehicular Technology, pp. To appear, 2006.

[2] G. Singh, "WIP: Adaptive Pedagogy through Intelligent Generation of Teaching Modules," presented at 36th. ASEE/IEEE Frontiers in Education Conference (FIE 2006) San Diego, CA, 2006.

[3] G. Singh, "Searching Biological Databases using Biolinguistic Methods," in Applied Mycology and Biotechnology: Genes, Genomics and Bioinformatics, vol. 5, D. Arora, R. Berka, and G. Singh, Eds.: Elsevier Science, 2006.

[4] H. Song, N. Venkatraman, C. Hansen, and G. Singh, "Enhancing Course Content by Cognitive Styles: A Case Study with Bioinformatics at High Schools," presented at 35th. ASEE/IEEE Frontiers in Education Conference (FIE 2005) Indianapolis, Indiana, 2005.

[5] G. Singh and H. Singh, "Functional Proteomics with Biolinguistic Methods," IEEE Engineering in Medicine and Biology, vol. 24 pp. 73-80, 2005.

[6] G. Singh and H. Singh, "Databases, Models and Algorithms for Functional Genomics: A Bioinformatics Perspective," Molecular Biotechnology, vol. 29, pp. 165-183, 2005.

[7] G. Singh, H. Song, and C. Chou, "Crash Detection System Using Hidden Markov Models," 2004 SAE World Congress & Exhibition, Safety Test Methodology (Part 1 of 3), Detroit, MI, 2004.

[8] G. Singh, "Learning information patterns in biological databases," in Data Mining and Knowledge Discovery Handbook: A Complete Guide for Researchers and Practitioners, O. Maimon and L. Rokach, Eds. New York: Springer-Verlag Press., 2005.

[9] G. Singh, "Genome Sequence Patterns and Gene Regulation: A Bioinformatics Perspective," in Handbook of Fungal Biotechnology vol. 2nd. Edition, D. Arora, L. Bridges, and A. Bhatnagar, Eds.: Marcel-Dekker Publishers 2004, pp. 163-172. [10] D. Jagan and G. Singh, "Reusing Microarrays within Closely Related Species: Experimental Validating through Phylogenetic Inference," Applied Bioinformatics, vol. 3, pp. 91-96, 2004.

[11] G. Singh, H. Song, D. Liu, D. Wildman, M. Goodman, C. Bliton, G. Kostov, and B. Athey, "A Non-Homology Method for Sensitive Information Retrieval from Biological Databases," presented at Proceedings of 7th. Joint Conference on Information Sciences, Durham, NC, 2003.

[12] G. Singh and D. Liu, "An Information Theoretical Algorithm for a High-Sensitivity Search of the Genomic Databases," Information Sciences: An International Journal, vol. To Appear, 2003.

[13] G. Singh and C. Hansen, "Cognitive assessement driven strategy for integrating Bioinformatics concepts in Computer Science curricula," Biological Language Conference, University of Pittsburgh, 2003.

[14] D. Jagan and G. Singh, "Word similarity based phylogenetic reconstruction for validating Micro-arrays reuse inclosely related species," Biological Language Conference, University of Pittsburgh, 2003.

[15] V. Ilavarsan, J. Wren, and G. Singh, "Functional inference properties of protein N-grams," Biological Language Conference, University of Pittsburgh, 2003.

[16] H. Song and G. Singh, "Intelligent Algorithms for Early Detection of Automotive Crashes," 2002 World Congress & Exhibition, Air Bags (Part A & B), Detroit, MI, 2002.

[17] G. Singh, S. Krawetz, and D. Womble, "Statistical Mining of the Matrix Attachment Regions in Genomic Sequences," in An Introduction to Bioinformatics. Totowa, NJ: Humana Press, 2002.

[18] G. Singh, "Statistical Modeling of DNA Sequences and Patterns," in Introduction to Bioinformatics, S. Krawetz and D. Womble, Eds. Totowa, NJ: Humana Press, 2002, pp. 357-373. [19] D. Liu and G. Singh, "Entropy Based Clustering of High Dimensional Genomic Data Sets ", Proceedings of the 2nd. SIAM International Conference on Data Mining (Workshop on Clustering High Dimensional Data Sets), Arlington, VA 2002.

[20] G. Singh and D. Liu, "Sequence Retrieval from Genomic Databases," Information Processing Letters (IPL), vol. 79, pp. 25-32, 2001.

[21] G. Singh and S. Krawetz, "Data Mining Matrix Associated Regions (MARs) for Gene Therapy," in Medical Data Mining and Knowledge Discovery, vol. 60, Studies in Fuzziness and Soft Computing, K. Cios, Ed.: Springer-Verlag, 2001, pp. 359-378. [22] G. Singh and S. Gobrogge, "Information System Architecture for Developing Reusable Testplans for Embedded Software," Microprocessors and Microsystems Journal, vol. 24, pp. 453-461, 2001.

[23] G. Singh, "Knowledge Based Strategies for Enhancing Quality of Service (QoS) in Distributed Simulations," IEEE Distributed Systems Online, vol. 2, 2001.

[24] D. Liu and G. Singh, "Text Mining and Genomic Database Retrieval: Is there a Connection?," Proceedings of the Atlantic Symposium on Computational Biology and Genome Information System and Technology (CBGIST), Duke University, NC, USA, 2001.

[25] S. Ganapathy and G. Singh, "Statistical Mining of S/MARt Database," Proceedings of the Atlantic Symposium on Computational Biology and Genome Information System and Technology (CBGIST), Duke University, NC, USA, 2001.

[26] G. Singh and S. Krawetz, "Data mining algorithms for discovering Matrix Association Regions," Proceedings of SPIE Data Mining and Knowledge Discovery Conference: Theory, Tools and Technology, Orlando, FL, 2000.

[27] G. Singh, "Discovering Matrix Association from Biological Databases," SIGKDD Explorations - The Newsletter of the Association of Computing Machinery (ACM) Special Interest Group on Knowledge Discovery and Data Mining (SIGKDD), vol. 1, pp. 39-45, 2000.

[28] D. Liu and G. Singh, "Profile Based Methods for Genomic Sequence Retrieval," SIGBIO - Newsletter of the Association of Computing Machinery (ACM) Special Interest Group on Biomedical Computing, vol. 20, pp. 6-13, 2000.

[29] G. Singh, "Detecting Biological Patterns: The Integration of Databases, Models and Algorithms," in Computer Methods in Molecular Biology: Humana Press, 1999, pp. 431-445 [30] G. Singh, "Computational Approaches for Gene Identification," in Computer Methods in Molecular Biology: Humana Press, 1999, pp. 351-364. [31] W. Walter, G. Singh, and S. Krawetz, "MARs Mission Update," Biochemical and Biophysical Research Communications, vol. 242, pp. 419-422, 1998.

[32] G. Singh, D. Stamper, and S. Krawetz, "A Web Tool for Detecting Matrix Association Regions," Trends in Genetics, vol. 14, pp. 87, 1998.

[33] G. Singh, "Computational Modeling and Prediction of the Human Immunodeficiency Virus (HIV) Strains," Proceedings of IEEE Joint Symposia on Intelligence and Systems: Intelligence in Neural and Biological Systems, Rockville, MD, 1998.

[34] G. Singh, "Information Theoretic Approaches for Biological Sequence Comparison," Proceedings of the Joint Conference on Information Systems (JCIS), Research Triangle Park, NC 1998.

[35] J. Kramer, M. Adams, G. Singh, N. Doggett, and S. Krawetz, "A matrix associated region localizes the human SOCS-1 gene to chromosome 16p13.13," Somatic Cell and Molecular Genetics, vol. 24, pp. 131-133, 1998.

[36] J. Kramer, M. Adams, G. Singh, N. Doggett, and S. Krawetz, "Extended analysis of the region encompassing the PRM1->PRM2->TNP2 domain: genomic organization, evolution and gene Identification," Jou.of Exp.Zoology, vol. 282, pp. 245-253, 1998.

[37] C. Hager, G. Singh, P. Schad, and et.al, "The Genome Sequence DataBase version 1.0 (GSDB): Improving Data Quality and Data Access," Nucleic Acid Res., vol. 26, pp. 21-26, 1998.

[38] G. Singh, J. Kramer, and S. Krawetz, "Mathematical model to predict regions of chromatin attachment to the nuclear matrix," Nucleic Acid Res., vol. 25, pp. 1419-1425, 1997.

[39] C. Hager, G. Singh, P. Schad, and et.al, "The Genome Sequence DataBase version 1.0 (GSDB): from Low Pass Sequences to Complete Genomes," Nucleic Acid Res., vol. 25 pp. 18-23, 1997.

[40] J. Kramer, G. Singh, and S. Krawetz, "Computer assisted search for sites of nuclear matrix attachment," Genomics, vol. 33, pp. 305-308, 1996.

[41] G. Singh and S. Krawetz, " ClonePlacer : A Tool for Simulating Map Coverage in Ordered Shotgun Sequencing," Genomics, vol. 25, pp. 555-558, 1995.

[42] G. Singh and S. Krawetz, " DNA-View : A Quality Assessment Tool for the Visualization of Large Sequenced Regions," Comput.Applic.Biosci., vol. 11, pp. 317-319, 1995.

[43] G. Singh, " Align-Viz : A Workbench for Multiple Sequence Alignment Visualization," Proceedings of International Conference on Computer Applications in Engineering and Medicine, Indianapolis, IN 1995.

[44] G. Singh, J. Nelson, T. MacAlinden, and S. Krawetz, "ISWAC: Integrated System for Wholistic Assembly of Chromosomes," DNA Sequence, vol. 5, pp. 67-76, 1994.

[45] G. Singh and S. Krawetz, "Computer based EXON Detection: An Evaluation Metric for Comparison," Intl. Journal of Genome Research, vol. 1, pp. 321-338, 1994.

[46] G. Singh, S. Abraham, and F. Westervelt, "Parallel Radiosity Computation on Shared Memory Multiprocessor," Proceedings of 36th. IEEE Midwest Symposium on Circuits and Systems, Detroit, MI, 1993.

[47] G. Singh, S. Abraham, and F. Westervelt, "Computing Radiosity Solution on a High Performance Workstation LAN," Proceedings of 1st. IEEE International Conference on High Performance Distributed Computing, Syracuse, NY, 1992.

[48] D. Liu and G. Singh, "Data mining approaches for information retrieval from genomic databases," Proceedings of SPIE Data Mining and Knowledge Discovery Conference: Theory, Tools and Technology, Orlando, FL